LOCUS pMOTag53M 3868 bp DNA circular 10-APR-2009 pMOTag53M made by Luisa Figueiredo replacing HYG by BLE in pMOTag43M, based on pMOTag series made in pBluescript II KS+ Oberholzer,M., Morand,S., Kunz,S., and Seebeck,T.  A vector series for rapid PCR-mediated C-terminal in-situ tagging of T. brucei genes. Mol. Biochem. Parasitol. 145, 2005, 117-120. FEATURES Location/Qualifiers rep_origin complement(135..440) /note="f1 origin of ss-DNA replication" promoter 625..644 /note="T7 Promoter" promoter complement(1679..1698) /note="T3 Promoter" rep_origin 2165..2732 /note="pUC origin" CDS complement(2880..3740) /note="AMP" promoter complement(1724..1845) /note="lac Promoter" 5'UTR complement(1146..1488) /label=a-b TUB Intergenic /note="I checked this" CDS complement(join(1648..1723,460..689)) /note="lac Z interrupted" /note="Stratagene says this is the Lac Z beta Gal alpha fragment CDS, but the ORF continues to 242." CDS complement(1506..1647) /source="Triple c-myc" CDS complement(765..1139) /source="BLE" BASE COUNT 972 a 1011 c 1010 g 875 t ORIGIN 1 ctaaattgta agcgttaata ttttgttaaa attcgcgtta aatttttgtt aaatcagctc 61 attttttaac caataggccg aaatcggcaa aatcccttat aaatcaaaag aatagaccga 121 gatagggttg agtgttgttc cagtttggaa caagagtcca ctattaaaga acgtggactc 181 caacgtcaaa gggcgaaaaa ccgtctatca gggcgatggc ccactacgtg aaccatcacc 241 ctaatcaagt tttttggggt cgaggtgccg taaagcacta aatcggaacc ctaaagggag 301 cccccgattt agagcttgac ggggaaagcc ggcgaacgtg gcgagaaagg aagggaagaa 361 agcgaaagga gcgggcgcta gggcgctggc aagtgtagcg gtcacgctgc gcgtaaccac 421 cacacccgcc gcgcttaatg cgccgctaca gggcgcgtcc cattcgccat tcaggctgcg 481 caactgttgg gaagggcgat cggtgcgggc ctcttcgcta ttacgccagc tggcgaaagg 541 gggatgtgct gcaaggcgat taagttgggt aacgccaggg ttttcccagt cacgacgttg 601 taaaacgacg gccagtgagc gcgcgtaata cgactcacta tagggcgaat tggagctcca 661 ccgcggtggc ggccgctcta gaactagtgG ATCcCCCGGG CTGCAGGAAT TCGATCCTCG 721 GACCCGTCGG GCCGCGTCGG ACCGGCGGTG TTGGTCGGCG TCGGTCAGTC CTGCTCCTCG 781 GCCACGAAGT GCACGCAGTT GCCGGCCGGG TCGCGCAGGG CGAACTCCCG CCCCCACGGC 841 TGCTCGCCGA TCTCGGTCAT GGCCGGCCCG GAGGCGTCCC GGAAGTTCGT GGACACGACC 901 TCCGACCACT CGGCGTACAG CTCGTCCAGG CCGCGCACCC ACACCCAGGC CAGGGTGTTG 961 TCCGGCACCA CCTGGTCCTG GACCGCGCTG ATGAACAGGG TCACGTCGTC CCGGACCACA 1021 CCGGCGAAGT CGTCCTCCAC GAAGTCCCGG GAGAACCCGA GCCGGTCGGT CCAGAACTCG 1081 ACCGCTCCGG CGACGTCGCG CGCGGTGAGC ACCGGAACGG CACTGGTCAA CTTGGCCATG 1141 ATCaagcttA AGCTAGCAAT TCGTTTGAAC TATTTTCTTT GATGAAAGGG TTACTATTCT 1201 TTCTCCTCTA GTAGGGCTGG TCGAGAAAAC AAGATTGAAA GAAAAGGCGG AAAGGGAGAG 1261 GGAGAAAGAG GTGTGACACG ACAGGAAGAA GCGAATAAGG GGAAGGAAGG CATACACGCA 1321 ACCACAGACG TGACAGGGTG CCTCCTACAC AAAGGGTGAG CAAAAAAACA AGAAAAACAT 1381 AGGTCCCAAG CGAATTAAAA ACATTTGAGA CAGAAAACAA ATTCACAAAA GAAAGAAAGA 1441 AAGAACATAA ATGAAAACCT ACACATGGTG CGACGTTGTC ACACTTTGTC GACGGCCGCA 1501 CTAGATCACA GCAGATCCTC CTCCGAGATC AGCTTCTGCT CCTCGGATCT CAGCAGATCC 1561 TCCTCCGAGA TCAGCTTCTG CTCCTCGGAT CTCAGCAGAT CCTCCTCCGA GATCAGCTTC 1621 TGCTCCTCGG ATCTCGATCG GCCGCCCtcg agggggggcc cggtacccag cttttgttcc 1681 ctttagtgag ggttaattgc gcgcttggcg taatcatggt catagctgtt tcctgtgtga 1741 aattgttatc cgctcacaat tccacacaac atacgagccg gaagcataaa gtgtaaagcc 1801 tggggtgcct aatgagtgag ctaactcaca ttaattgcgt tgcgctcact gcccgctttc 1861 cagtcgggaa acctgtcgtg ccagctgcat taatgaatcg gccaacgcgc ggggagaggc 1921 ggtttgcgta ttgggcgctc ttccgcttcc tcgctcactg actcgctgcg ctcggtcgtt 1981 cggctgcggc gagcggtatc agctcactca aaggcggtaa tacggttatc cacagaatca 2041 ggggataacg caggaaagaa catgtgagca aaaggccagc aaaaggccag gaaccgtaaa 2101 aaggccgcgt tgctggcgtt tttccatagg ctccgccccc ctgacgagca tcacaaaaat 2161 cgacgctcaa gtcagaggtg gcgaaacccg acaggactat aaagatacca ggcgtttccc 2221 cctggaagct ccctcgtgcg ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc 2281 gcctttctcc cttcgggaag cgtggcgctt tctcatagct cacgctgtag gtatctcagt 2341 tcggtgtagg tcgttcgctc caagctgggc tgtgtgcacg aaccccccgt tcagcccgac 2401 cgctgcgcct tatccggtaa ctatcgtctt gagtccaacc cggtaagaca cgacttatcg 2461 ccactggcag cagccactgg taacaggatt agcagagcga ggtatgtagg cggtgctaca 2521 gagttcttga agtggtggcc taactacggc tacactagaa ggacagtatt tggtatctgc 2581 gctctgctga agccagttac cttcggaaaa agagttggta gctcttgatc cggcaaacaa 2641 accaccgctg gtagcggtgg tttttttgtt tgcaagcagc agattacgcg cagaaaaaaa 2701 ggatctcaag aagatccttt gatcttttct acggggtctg acgctcagtg gaacgaaaac 2761 tcacgttaag ggattttggt catgagatta tcaaaaagga tcttcaccta gatcctttta 2821 aattaaaaat gaagttttaa atcaatctaa agtatatatg agtaaacttg gtctgacagt 2881 taccaatgct taatcagtga ggcacctatc tcagcgatct gtctatttcg ttcatccata 2941 gttgcctgac tccccgtcgt gtagataact acgatacggg agggcttacc atctggcccc 3001 agtgctgcaa tgataccgcg agacccacgc tcaccggctc cagatttatc agcaataaac 3061 cagccagccg gaagggccga gcgcagaagt ggtcctgcaa ctttatccgc ctccatccag 3121 tctattaatt gttgccggga agctagagta agtagttcgc cagttaatag tttgcgcaac 3181 gttgttgcca ttgctacagg catcgtggtg tcacgctcgt cgtttggtat ggcttcattc 3241 agctccggtt cccaacgatc aaggcgagtt acatgatccc ccatgttgtg caaaaaagcg 3301 gttagctcct tcggtcctcc gatcgttgtc agaagtaagt tggccgcagt gttatcactc 3361 atggttatgg cagcactgca taattctctt actgtcatgc catccgtaag atgcttttct 3421 gtgactggtg agtactcaac caagtcattc tgagaatagt gtatgcggcg accgagttgc 3481 tcttgcccgg cgtcaatacg ggataatacc gcgccacata gcagaacttt aaaagtgctc 3541 atcattggaa aacgttcttc ggggcgaaaa ctctcaagga tcttaccgct gttgagatcc 3601 agttcgatgt aacccactcg tgcacccaac tgatcttcag catcttttac tttcaccagc 3661 gtttctgggt gagcaaaaac aggaaggcaa aatgccgcaa aaaagggaat aagggcgaca 3721 cggaaatgtt gaatactcat actcttcctt tttcaatatt attgaagcat ttatcagggt 3781 tattgtctca tgagcggata catatttgaa tgtatttaga aaaataaaca aataggggtt 3841 ccgcgcacat ttccccgaaa agtgccac //